This conference report summarizes the contributions to and discussions at the 3rd Asia–Pacific Transport Working Group (APTWG) meeting held in Jeju-island, Korea, on 21–24 May 2013. The main objective of the meeting is to develop a predictive understanding of transport mechanisms in magnetically confined fusion plasmas. In an effort to accomplish this objective, four technical working groups were organized under the headings: (1) transport barrier formation and confinement enhancement, (2) 3D effects and Magnetohydrodynamic–turbulence interaction, (3) momentum transport and non-locality and (4) particle/impurity transport and energetic particles.