Understanding energetic particle transport due to magnetohydrodynamic instabilities excited by energetic particles is essential to apprehend alpha particle confinement in a fusion burning plasma. In the large helical device (LHD), beam ion and deuterium–deuterium fusion-born triton transport due to resistive interchange mode destabilized by helically-trapped energetic ions (EIC) are studied employing comprehensive neutron diagnostics, such as the neutron flux monitor and a newly developed scintillating fiber detector characterized by high detection efficiency. Beam ion transport due to EIC is studied in deuterium plasmas with full deuterium or hydrogen/deuterium beam injections. The total neutron emission rate (Sn) measurement indicates that EIC induces about a 6% loss of passing transit beam ions and a 60% loss of helically-trapped ions. The loss rate of helically-trapped ions, which drive EIC, is larger than the loss rate of passing transit beam ions. Furthermore, the drop of Sn increasing linearly with the EIC amplitude shows that barely confined beam ions existing near the confinement-loss boundary are lost due to EIC. In full deuterium conditions, a study of deuterium–deuterium fusion-born triton transport due to EIC is performed by time-resolved measurement of total secondary deuterium–tritium neutron emission rate (Sn_DT). Drop of Sn_DT increases substantially with EIC amplitude to the third power and reaches up to 30%. The relation shows that not only tritons confined in confined-loss boundary, but also tritons confined in the inner region of a plasma, are substantially transported.